FastQCFastQC Report
Thu 14 Sept 2023
SRR15803292_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15803292_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66948137
Total Bases5 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAA3579810.5347139084691781No Hit
GAGGGAGCCTGAGAAACGGCTACCACATCCAAACTGTAGGCACCATCAAT1369490.2045598371169014No Hit
CAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGAACTGTAGGCACCATCA1208320.18048597827300258No Hit
CGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGAAC864960.1291985167563363No Hit
CGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTAA817810.1221557516977657No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAATCC791550.11823331245199549No Hit
GACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGAACT762470.11388965162690039No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAATAC699340.10445996428548864No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAATCA683040.10202524380924895No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)