FastQCFastQC Report
Thu 14 Sept 2023
SRR15803293_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15803293_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51779203
Total Bases3.8 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGAACTGTAGGCACCATCA1999330.3861260668689705No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTAACTGTAGGCACCATCAAT1694430.3272414216186371No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAAT1662260.3210285025051467No Hit
GCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGAACTGTA990030.19120224774413774No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCAACTGTAGGCACCATCAAT828220.1599522495547102No Hit
CCGCCGCGCGTCGCGGCGTGGGAAATGTGGAACTGTAGGCACCATCAATA700560.1352975633865975No Hit
CCGCCGCGCGTCGCGGCGTGGGAAATGTGGAACTGTAGGCACCATCAATC663120.1280668611295543No Hit
GGACAAGTGGCGTTCAGCCACCCGAGATTGAAACTGTAGGCACCATCAAT635520.12273653574775957No Hit
CAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGAACTG627190.12112778174665993No Hit
CGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAAACTGTAGGCACCAT607780.11737917248359345No Hit
CTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGAACTGTAGGCACCAT601610.11618757438193862No Hit
CCGCCGCGCGTCGCGGCGTGGGAAATGTGGAACTGTAGGCACCATCAATT580860.11218017395903139No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAACTGTAGGCACCATCAAT573170.1106950217059154No Hit
CCACTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAA571690.11040919266370322No Hit
GCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAACTGTAGGCACCA569820.1100480438063135No Hit
GGGACAAGTGGCGTTCAGCCACCCGAGATTGAACTGTAGGCACCATCAAT540210.10432953168475768No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)