FastQCFastQC Report
Thu 14 Sept 2023
SRR15803294_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15803294_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60460001
Total Bases4.5 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAA3677170.6081987990704797No Hit
CAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGAACTGTAGGCACCATCA1066420.1763843834537813No Hit
GAGGGAGCCTGAGAAACGGCTACCACATCCAAACTGTAGGCACCATCAAT1037480.17159774774069225No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAATCC739240.12226926691582424No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAATAC659670.10910849968394808No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAACTGTAGGCACCATCAATCA627500.10378762646729033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)