FastQCFastQC Report
Thu 14 Sept 2023
SRR15803295_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15803295_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41443631
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAACTGTAGGCACCATCAAT5185541.251227239234902No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTAACTGTAGGCACCATCAAT1385100.3342129940303734No Hit
GCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGAACTGTA1212070.2924623086234891No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCAACTGTAGGCACCATCAAT1049940.2533417016477152No Hit
CCGCCGCGCGTCGCGGCGTGGGAAATGTGGAACTGTAGGCACCATCAATA825940.1992923834303997No Hit
GGGACAAGTGGCGTTCAGCCACCCGAGATTGAACTGTAGGCACCATCAAT700290.16897409399287433No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACTGTAGGCACCATC667700.16111040077545327No Hit
CCGCCGCGCGTCGCGGCGTGGGAAATGTGGAACTGTAGGCACCATCAATC620880.1498131281016376No Hit
CCGCCGCGCGTCGCGGCGTGGGAAATGTGGAACTGTAGGCACCATCAATT611460.14754016123732014No Hit
CGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAAACTGTAGGCACCAT517980.12498422254555834No Hit
GCTAGCTGCGAGAATTAATGTGAATTGCAGGAACTGTAGGCACCATCAAT496750.11986160189487258No Hit
GTGCGGTAACGCGACCGATCCCGGAGAAGCCAACTGTAGGCACCATCAAT477740.11527464859437629No Hit
TGGAGCCGGGCGTGGAATAGCCCGGCTCGCTGGAACTGTAGGCACCATCA476010.11485721412778721No Hit
CCGCCGCGCGTCGCGGCGTGGGAAATGTGGAACTGTAGGCACCATCAATG446570.10775358944779719No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGAACTGTAGGCACCATCAATAA432870.10444789453897028No Hit
CGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTAACTGTAGGCACCATC425400.1026454462930625No Hit
CGTGGAGCCGGGCGTGGAATAGCCCGGCTCGCTGGAACTGTAGGCACCAT422330.10190468108356625No Hit
CCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAAACTGTAGGCACCAT415500.1002566594611365No Hit
GGACAAGTGGCGTTCAGCCACCCGAGATTGAAACTGTAGGCACCATCAAT414640.10004914868583788No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)