FastQCFastQC Report
Wed 28 Jun 2023
SRR1585492_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585492_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38133790
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length21-42
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTATGCCGACCTGCGATGAGGCGGCT3665810.9613022990896001No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG2483410.6512360822252391No Hit
GGAGAGCGACGCTCAGACAGG1973360.5174833133554257No Hit
ACTATGCCGACCTGCGATGCGGCGGCG1703770.44678748165341026No Hit
GGAGAGCGACGCTCAGACAGGC1200430.31479430709614753No Hit
ACGATGCCGACCTGCGATGAGGCGGCT1193940.31309240440040187No Hit
ACTATGCCGACCTGCGATGCGGCGGCT1053440.27624844003179333No Hit
CCTCTAGCATCACCAGTATTAGAGGC923700.24222612019418996No Hit
AACTATTCAGACCGGCGATGCGGCGGCT922460.2419009492631076No Hit
GATCAAAAGGGACAAGCATCAAGCACGCAAC876690.229898470621462No Hit
AATACAAGCTTGGGCTGCAGGTCGAC813390.21329901905895007No Hit
CTCTAGCATCACCAGTATTAGAGGC713030.18698115241102445No Hit
ACGATGCCGACCTGCGATGCGGCGGCT656400.17213080577618958No Hit
AATACAAGCTTGGGCTGCAGGTCG545470.1430411191754085No Hit
ACTATGCCGACCTGCGATGAGGCGGC499260.13092325730015297No Hit
ACCTCTAGCATCACCAGTATTAGAGGC493960.12953341380439762No Hit
ACTATGCCGACCTGCGATGAGGCGGCG470970.12350463984828154No Hit
TCTACTTCATAATTTGTGGTAGTGGGTT468810.12293821306510577No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCG436400.11443918897125097No Hit
AATACAAGCTTGGGCTGCAGGTCGACCC431550.1131673510553239No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG428090.11226001926375531No Hit
ACGATGCCGACCTGCGATGAGGCGGCG424100.1112137031226112No Hit
ACCTGGTATTGCAGTCAATACAGG420960.11039028641003162No Hit
AATACAAGCTTGGGCTGCAGGTCGACC412160.10808262173783408No Hit

[OK]Adapter Content

Adapter graph