FastQCFastQC Report
Wed 28 Jun 2023
SRR1585494_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585494_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33869788
Total Bases968 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTACTTCATAATTTGTGGTAGTGGGTT1254800.3704776658182803No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG631370.18641096897329268No Hit
ACGATTAAAGTCCTACGTGATCTGAGTTC406350.11997417875777669No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCGC382100.11281440556994334No Hit
CGATTAAAGTCCTACGTGATCTGAGTTC362230.10694782028160318No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)