FastQCFastQC Report
Wed 28 Jun 2023
SRR1585497_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585497_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18009184
Total Bases511.1 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATACAAGCTTGGGCTGCAGGTCGACCCG1058440.5877223532171141No Hit
TCTACTTCATAATTTGTGGTAGTGGGTT1007650.5595200759790117No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCGC494360.2745043862065044No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCG440680.24469737218521395No Hit
AATACAAGCTTGGGCTGCAGGTCGAC431660.2396888165504889No Hit
TGTGGGGGCCGGGCCACCCCTCCCCCGGCGC342950.1904306158457818No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGC333860.18538319115402452No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG314890.17484967669828905No Hit
TGTGGGGGCCGGGCCACCCCTCCCCCGGCG308910.17152914868324962No Hit
TCTACTTCATAATTTGTGGTAGTGGGT291570.1619007279841219No Hit
AACTATTCAGACCGGCGATGCGGCGGCT275490.15297195031157437No Hit
TCTCTTCTGGCTCCACGAGACCGGCCT258160.1433490823348798No Hit
TGGTGGGGCCGGGCCACCCCTCCCCCGGCGC255440.14183874183305584No Hit
AGCTTGGGCTGCAGGTCGACCCG251380.13958433652518626No Hit
CCTCTAGCATCACCAGTATTAGAGGC249250.1384016066469197No Hit
TGGTGGGGCCGGGCCACCCCTCCCCCGGCG223880.12431434983395138No Hit
TCTCTTCTGGCTCCAAGCGCCCGGCCG220720.12255968954506767No Hit
AATACAAGCTTGGGCTGCAGGTCG207280.1150968305948787No Hit
AATACAAGCTTGGGCTGCAGGTCGACC198700.11033259474721342No Hit
ACCTCTAGCATCACCAGTATTAGAGGC195600.10861125079292876No Hit
AATACAAGCTTGGGCTGCAGGTCGACCC182760.10148155518873037No Hit

[OK]Adapter Content

Adapter graph