FastQCFastQC Report
Wed 28 Jun 2023
SRR1585503_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585503_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32064755
Total Bases898.3 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGAGCGACGCTCAGACAGG1260080.3929797685963919No Hit
GGAGAGCGACGCTCAGACAGGC1237950.3860781097500979No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG1122260.3499979962422916No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT978590.30519179079958664No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT529680.1651907210892458No Hit
CCTCTAGCATCACCAGTATTAGAGGC526180.1640991799251234No Hit
GGTCGGTTTCTATCTACTTCAAATTCCTC462970.1443859465010726No Hit
GGTCGGTTTCTATCTACTTCAAATTCCT433080.13506418495946718No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC411690.12839330910215907No Hit
AATACAAGCTTGGGCTGCAGGTCGAC404250.12607300445613884No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC335720.10470062846262196No Hit
ACGATTAAAGTCCTACGTGATCTGAGTTC335280.10456340614484658No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)