FastQCFastQC Report
Wed 28 Jun 2023
SRR1585507_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585507_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33759368
Total Bases946.5 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATACAAGCTTGGGCTGCAGGTCGACCCG2081050.6164363029544866No Hit
GGAGAGCGACGCTCAGACAGG1394870.41318012825358574No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT823830.2440300422685638No Hit
CCTCTAGCATCACCAGTATTAGAGGC755670.22384009084530257No Hit
GGAGAGCGACGCTCAGACAGGC687730.20371530651877132No Hit
AATACAAGCTTGGGCTGCAGGTCGAC666930.19755405373702495No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT524470.1553553964635831No Hit
AATACAAGCTTGGGCTGCAGGTCG512000.1516616069352957No Hit
AGCTTGGGCTGCAGGTCGACCCG501540.14856320769985978No Hit
CTCTAGCATCACCAGTATTAGAGGC461830.136800546740093No Hit
GGTCGGTTTCTATCTACTTCAAATTCCT432420.12808889076359486No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC420960.12469427745211344No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCGTG407610.12073981953690603No Hit
ACCTCTAGCATCACCAGTATTAGAGGC360570.10680590939972573No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC343940.10187986931508906No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)