FastQCFastQC Report
Wed 28 Jun 2023
SRR1585512_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585512_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23613093
Total Bases670.6 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATACAAGCTTGGGCTGCAGGTCGACCCG1514220.641262879030714No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT593380.25129278913186004No Hit
GGAGAGCGACGCTCAGACAGG576850.24429243555683283No Hit
CCTCTAGCATCACCAGTATTAGAGGC557270.2360004256960323No Hit
AATACAAGCTTGGGCTGCAGGTCGAC508680.21542285883513862No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC447270.18941610063535513No Hit
GGAGAGCGACGCTCAGACAGGC417870.1769653810282287No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC383390.16236331259102735No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT372410.1577133499622434No Hit
AAAGCACCCAACTTACACTTAGGAGATT344060.14570729891251433No Hit
ACCTCTAGCATCACCAGTATTAGAGGC316560.13406121764734505No Hit
GGTCGGTTTCTATCTACTTCAAATTCCT272260.11530043946381781No Hit
CTCTAGCATCACCAGTATTAGAGGC269510.11413583133730089No Hit
AATACAAGCTTGGGCTGCAGGTCG267620.1133354279339856No Hit
AATACAAGCTTGGGCTGCAGGTCGACC246060.10420490022209289No Hit
GGTCGGTTTCTATCTACTTCAAATTCCTC237590.10061790719242075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)