FastQCFastQC Report
Wed 28 Jun 2023
SRR1585513_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585513_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20772012
Total Bases599.2 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATACAAGCTTGGGCTGCAGGTCGACCCG1601970.7712156145490384No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT933510.44940759710710737No Hit
GATCAAAAGGGACAAGCATCAAGCACGCAAC901750.4341177927299484No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT494430.23802701442691251No Hit
CCTCTAGCATCACCAGTATTAGAGGC479870.2310175826973333No Hit
AATACAAGCTTGGGCTGCAGGTCGAC388580.187069023453289No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC381990.18389648532843134No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCGTG380900.18337174078274168No Hit
GGAGAGCGACGCTCAGACAGGC363700.17509136813516188No Hit
TGCAGCTCAAAACGCTTAGCCTAGCCACAC350830.16889553115990882No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC342880.16506826589547513No Hit
AAAGCACCCAACTTACACTTAGGAGATT272330.131104295529966No Hit
ACCTCTAGCATCACCAGTATTAGAGGC260990.12564502658673604No Hit
AATACAAGCTTGGGCTGCAGGTCGACC230190.1108173825433954No Hit
AATACAAGCTTGGGCTGCAGGTCG221050.10641723103183263No Hit
GGAGAGCGACGCTCAGACAGG220990.106388346010969No Hit
ATGCAGCTCAAAACGCTTAGCCTAGCCACAC215290.10364426902892218No Hit
CTGGTCCGATGGTAGTGGGTTATCAGAA212850.10246961151380041No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)