FastQCFastQC Report
Wed 28 Jun 2023
SRR1585526_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585526_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11841515
Total Bases337.1 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCTGGGAATACCGGGTGCTGTAGGCTT649240.5482744395459533No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC374870.3165726682776655No Hit
TGGGGGGGCGGGGCCACCCCTCCCAGGGCG289300.24430995527177057No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC277030.23394810545778982No Hit
TGGGGGGGCCGGGCCCCCCCTCCACCGGCG253820.21434757292457932No Hit
TGGGGGGGCCGGGCCCCCCCTCCACCGGCGC210930.17812754533520417No Hit
CTGGTCCGATGGTAGTGGGTTATCAGAA209400.17683548093297186No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT207870.17554341653073952No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG192080.16220897410508706No Hit
TGGTCCGATGGTAGTGGGTTATCAGAA175220.14797093108440937No Hit
AGCTTGGGCTGCAGGTCGACCCG173470.1464930796439476No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGC168210.14205108045718812No Hit
CTGGTCCGAAGGTAGTGAGTTATCTCAA167620.14155283340011815No Hit
CCTCTAGCATCACCAGTATTAGAGGC157550.13304885396843225No Hit
TCGACTGCCTCATTTGTGGTAGTGGGGG147390.12446887074837976No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG146120.1233963728458732No Hit
TGCTAAGACTTCACCAGTCAAAGCGAA142250.1201282099461091No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)