FastQCFastQC Report
Wed 28 Jun 2023
SRR1585528_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585528_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17998482
Total Bases510.5 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGAGCGACGCTCAGACAGG1720170.9557305999472623No Hit
GGAGAGCGACGCTCAGACAGGC1229750.6832520653686238No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG940170.5223607190873096No Hit
GATCAAAAGGGACAAGCATCAAGCACGCAAC750360.4169018253872743No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGC738060.41006791572755963No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG737820.4099345711488335No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT623350.3463347631205787No Hit
AAAGCACCCAACTTACACTTAGGAGATT337900.18773805479817685No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC316120.17563703427877975No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT301070.1672752179878281No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC286540.15920231495078307No Hit
AATACAAGCTTGGGCTGCAGGTCGAC271030.15058492155060632No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCG255580.1420008642951111No Hit
CTGGTCCGATGGTAGTGGGTTATCAGAA239250.13292787691762006No Hit
CCTCTAGCATCACCAGTATTAGAGGC235000.13056656666934466No Hit
GGAGAGCGACGCTCAGACAGGCG230730.12819414437284213No Hit
GGAGAGATCCTTCCGCAGGTTC229980.1277774425643229No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCGC220850.12270479254861603No Hit
GGTCGGTTTCTATCTACTTCAAATTCCT208730.11597089132294601No Hit
CTGGTCCGAAGGTAGTGAGTTATCTCAA202330.11241503589024897No Hit
TTGGGGGGCCGGGCCCCCCCTCCCACGGCG194820.10824246178094353No Hit
GGTCGGTTTCTATCTACTTCAAATTCCTC193580.10755351479085848No Hit

[OK]Adapter Content

Adapter graph