FastQCFastQC Report
Wed 28 Jun 2023
SRR1585532_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585532_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25995614
Total Bases726.5 Mbp
Sequences flagged as poor quality0
Sequence length21-42
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGAGCGACGCTCAGACAGG2652211.020252878043196No Hit
GGAGAGCGACGCTCAGACAGGC1922250.7394516628843619No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG1125670.43302304765719324No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT1032660.3972439350730473No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG935470.35985685893012564No Hit
CCTCTAGCATCACCAGTATTAGAGGC767220.29513440228801674No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGC580630.22335690936171002No Hit
GGTCGGTTTCTATCTACTTCAAATTCCT577850.222287498191041No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT498160.19163232689945311No Hit
GGTCGGTTTCTATCTACTTCAAATTCCTC425490.16367761115394314No Hit
AATACAAGCTTGGGCTGCAGGTCGAC408360.1570880380051804No Hit
AGCTTGGGCTGCAGGTCGACCCG395980.1523256961732083No Hit
CTCTAGCATCACCAGTATTAGAGGC392160.15085621751423145No Hit
GGAGAGCGACGCTCAGACAGGCG379570.14601309282404332No Hit
ACCTCTAGCATCACCAGTATTAGAGGC350110.13468041185716945No Hit
AAAGCACCCAACTTACACTTAGGAGATT336970.12962571301451084No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC322800.12417479348631658No Hit
CTGGTCCGATGGTAGTGGGTTATCAGAA306720.1179891346286339No Hit
CGATTAAAGTCCTACGTGATCTGAGTT297480.11443468886712965No Hit
ACGATTAAAGTCCTACGTGATCTGAGTT292680.11258822353647811No Hit
AATACAAGCTTGGGCTGCAGGTCG267820.10302507184481197No Hit

[OK]Adapter Content

Adapter graph