FastQCFastQC Report
Wed 28 Jun 2023
SRR1585533.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585533.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13958916
Total Bases396.7 Mbp
Sequences flagged as poor quality0
Sequence length21-48
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG1172120.8396927096631287No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGC1153390.8262747623096235No Hit
GGAGAGCGACGCTCAGACAGG616620.44173917229676No Hit
GGAGAGCGACGCTCAGACAGGC595990.4269600877317408No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCGC352340.25241215005520484No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCG333970.2392521023838814No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCGC219380.15716120076945803No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG213210.1527410867720674No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCG186500.13360636313020294No Hit
AGCTTGGGCTGCAGGTCGACCCG158280.11338989359918779No Hit
GGGGGGGGGCCACGCGCGCGTCCCCC157100.11254455575203691No Hit
GGAGAGCGACGCTCAGACAGGCG156490.11210755906834026No Hit
GGTCGGTTTCTATCTACTTCAAATTCCTC151090.10823906383561589No Hit
GGGGGGGCCGGGCCAACCCTCCCAAGGCGC144650.10362552507658905No Hit
TTGGGGGGCCGGGCCCCCCCTCCCACGGCG143480.10278735110949876No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)