FastQCFastQC Report
Wed 28 Jun 2023
SRR1585537.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585537.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7314753
Total Bases211.2 Mbp
Sequences flagged as poor quality0
Sequence length21-48
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGC1287521.760168798591012No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG881141.2046066353846807No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCGC387230.5293821951335882No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCG245440.3355410633824546No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCGC222370.30400206268072205No Hit
AGCTTGGGCTGCAGGTCGACCCG194750.2662427562489123No Hit
TTGGGGGGCCGGGCCCCCCCTCCCACGGCGC166510.22763584771761944No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCG137750.18831804710288919No Hit
CGATTAAAGTCCTACGTGATCTGAGTTC134420.1837656035685689No Hit
TGGTGGGGCCGGGCCACCCCTCCCCCGGCGC127710.17459236149190546No Hit
ACGATTAAAGTCCTACGTGATCTGAGTTC120820.16517304138635988No Hit
TGGTGGGGCCGGGCCCCCCCTCCCCCGGCGC119780.16375125721948505No Hit
ACTATGCCGACCTGCGATGAGGCGGCT119250.1630266941344431No Hit
TTGGGGGGCCGGGCCCCCCCTCCCACGGCG106160.1451313530340669No Hit
TGGTGGGGCCGGGCCCCCCCTCCCACGGCGC105410.14410602791372448No Hit
TGTGGGGGCCGGGCCACCCCTCCCCCGGCGC92140.12596460878446614No Hit
TTGTGGGGCCGGGCCCCCCCTCCCCCGGCGC90800.12413269456945436No Hit
TGTGGGGGCCGGGCCCCCCCTCCCACGGCGC77930.10653811550437862No Hit
GGAGAGCGACGCTCAGACAGGC77790.10634672148191471No Hit
GGTCGGTTTCTATCTACTTCAAATTCCT77290.10566317140168642No Hit
TTGTGGGGCCGGGCCACCCCTCCCCCGGCGC76310.10432341324443901No Hit
TGCTAAGACTTCACCAGTCAAAGCGAA76070.10399530920592943No Hit
TGTGGGGGCCGGGCCCCCCCTCCCCCGGCGC75410.10309302310002812No Hit
TGGTGGGGCCGGGCCACCCCTCCCCCGGCG74240.10149351591229397No Hit
CGATTAAAGTCCTACGTGATCTGAGTT73860.10097401785132047No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)