FastQCFastQC Report
Wed 28 Jun 2023
SRR1585551.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585551.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24034489
Total Bases686.2 Mbp
Sequences flagged as poor quality0
Sequence length21-48
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCAATTTTTGACAGTCTCTACGGAGACTG2738891.139566562035082No Hit
GGCAATTTTTGACAGTCTCTACGGAGACTG1327100.5521648494378225No Hit
CCTCTAGCATCACCAGTATTAGAGGC770520.32058929981827367No Hit
AGCTTGGGCTGCAGGTCGACCCGTGC640460.26647539708458123No Hit
AAGGCCTACTTCACAAAGCGCCTTCC610850.25415560114467173No Hit
ACCTCTAGCATCACCAGTATTAGAGGC601230.25015301968766634No Hit
TGGCCATTTTTGACAGTCTCTACGGAGACTG572790.23832002419523043No Hit
TGCTAAGACTTCACCAGTCAAAGCGA571560.23780825962224533No Hit
GATCAAAAGGGACAAGCATCAAGCACGCAAC524820.2183612058488117No Hit
TGGTCCGATGGTAGTGGGTTATCAGAA521310.2169008045063908No Hit
CTGGTCCGATGGTAGTGGGTTATCAGAA460830.19173696599083093No Hit
ACTGGCAATTTTTGACAGTCTCTACGGAGACTG421870.17552692715871762No Hit
TGACAGTCTCTACGGAGACTG404410.16826236663488042No Hit
TTGACAGTCTCTACGGAGACTG398970.16599895258850728No Hit
CTGGCAATTTTTGACAGTCTCTACGGAGACTG365400.15203152436484088No Hit
TTTTGACAGTCTCTACGGAGACTG301220.12532823144274047No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC291180.12115090110715482No Hit
AAGGCCTACTTCACAAAGCGCCTTC278330.11580441756011539No Hit
GCAATTTTTGACAGTCTCTACGGAGACTG274650.11427328452874533No Hit
TTGGCAATTTTTGACAGTCTCTACGGAGACTG274580.11424415971564862No Hit
GGCACTTTTTGACAGTCTCTACGGAGACTG266820.11101546614949874No Hit
TGCTAAGACTTCACCAGTCAAAGCGAA253690.10555248335007247No Hit

[OK]Adapter Content

Adapter graph