FastQCFastQC Report
Wed 28 Jun 2023
SRR1585557.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1585557.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15304557
Total Bases452.3 Mbp
Sequences flagged as poor quality0
Sequence length21-48
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGC1172670.7662227661996358No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCG998740.6525768762859324No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCGC368020.24046432706284804No Hit
ACGATTAAAGTCCTACGTGATCTGAGTTC302910.19792144261346475No Hit
TTGGGGGGCCGGGCCCCCCCTCCCCCGGCG288180.1882968582494743No Hit
GGTCGGTTTCTATCTACTTCAAATTCCTC280830.18349436706988645No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCGC241940.15808363482850238No Hit
AATACAAGCTTGGGCTGCAGGTCGACCCG230770.1507851550358498No Hit
CGATTAAAGTCCTACGTGATCTGAGTTC216650.14155914476975714No Hit
ACTTTGCAAGGAGAGCCAAAGCTAAGACC173190.11316237379494225No Hit
AACTTTGCAAGGAGAGCCAAAGCTAAGACC168580.11015019905509191No Hit
TGGGGGGGCCGGGCCCCCCCTCCCCCGGCGCGACC160700.10500140579044528No Hit
TTGGGGGGCCGGGCCACCCCTCCCCCGGCG153590.10035573064937457No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)