FastQCFastQC Report
Wed 28 Jun 2023
SRR1587296.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1587296.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13670646
Total Bases683.5 Mbp
Sequences flagged as poor quality0
Sequence length50
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACGAACTACAGCGAAGGCATTCTTCAAGGATACCTTCCTCAATCAAG532510.38952804424896964No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)