FastQCFastQC Report
Sat 16 Sept 2023
SRR15929424_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15929424_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67824088
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length14-137
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCTGAGGCGTGATGACGAGGCAC22411063.3042921270095076No Hit
ACGGTGCTGAAGCAACAAATGCCCTGCTTCCAGGAAAAGCCTCTAAGC18743912.763606640755715No Hit
AAAGGCTGAGGCGTGATGACGAGGCAC14125952.08273349727902No Hit
TAAGGCTGAGGCGTGATGACGAGGCAC13221191.9493354632354216No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA12652941.8655525452845014No Hit
AAGGCTGAGGCGTGATGACGAGGCACT3365030.49614084010978515No Hit
AAAGGCTGAGGCGTGATGACGAGGCACT2071930.3054858621910257No Hit
TAAGGCTGAGGCGTGATGACGAGGCACT1983460.2924418239136515No Hit
AGGCTGAGGCGTGATGACGAGGCAC1849400.2726759849686442No Hit
AAGGCTGAGGCGTGATGACGAGGCA1788720.26372931103769504No Hit
ACGGTCCTAAGGTAGCG1713230.25259904711140385No Hit
ACGGTGCTGAAGCAACAAATGCCCTGCTTCCAGGAAAAGCCTCTAAG1624780.23955795763888488No Hit
TTAACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGC1615070.23812631288164168No Hit
ACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGC1608840.23720776016921893No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACC1600880.23603413583681362No Hit
TAACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGC1467400.21635381223260977No Hit
TACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA1429930.2108292263362244No Hit
TCGCGCTGTGCGGGTTCAAGTCCCGCTCCGGGTACCA1339630.1975153724145911No Hit
AAAGGCTGAGGCGTGATGACGAGGCA1171600.1727409884228742No Hit
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCC1162290.17136831976273678No Hit
ATCCGGTGGTTCTGAATGGAAGGGCCATCG1154090.170159309772068No Hit
TAAGGCTGAGGCGTGATGACGAGGCA1111160.16382970015018852No Hit
AGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCG1036650.15284392766180652No Hit
ACGGTGCTGAAGCAACAAATGCCCTGCTTCC980460.14455926042086994No Hit
TTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA953310.1405562578298141No Hit
ATTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTC909160.13404677111176194No Hit
CAAGGCTGAGGCGTGATGACGAGGCAC850120.12534189917894656No Hit
AGGTAGCGCCTCGTGA843850.12441744885681323No Hit
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCC804210.11857291763362893No Hit
TCGACACACTATCATTAACTG795260.11725332746088676No Hit
TCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGCT758200.11178919206403483No Hit
AGGGCTTACGGGTTCAAGTCCCGTCCTCGGTACCA707810.10435967823113229No Hit
ATTCATCTCCGGGGGTAGAGCACTGTTTCGGC705260.10398370561208282No Hit
AGGAAAAGCCTCTAAGC695350.10252257280628677No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)