FastQCFastQC Report
Sat 16 Sept 2023
SRR15929425_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15929425_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35237919
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length14-136
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA9095012.5810292599855287No Hit
AGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCG1438890.40833569087890803No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACC1218090.34567591803590897No Hit
TACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA1047710.2973245951328738No Hit
TCGCGCTGTGCGGGTTCAAGTCCCGCTCCGGGTACCA900250.2554776290847368No Hit
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCC787430.22346098247175156No Hit
TTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA690180.1958628714709288No Hit
ACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCA543630.15427414995760674No Hit
AGGGCTTACGGGTTCAAGTCCCGTCCTCGGTACCA526880.1495207478057941No Hit
TTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCG500230.14195787214335784No Hit
CGGTGGTTCAAGTCCACTCAGGCCTACCA483760.1372839298484113No Hit
AAGGCTGAGGCGTGATGACGAGGCAC480950.13648649342771915No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCAC457890.1299424066443878No Hit
TCGACACACTATCATTAACTG445170.12633265886104114No Hit
ATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA409140.1161078779935898No Hit
TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTG387540.10997811760677467No Hit
ACATGGCTACTAAATACCGCAAGTAATAGTACCTGTG353010.10017901454396327No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)