FastQCFastQC Report
Sat 16 Sept 2023
SRR15929426_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15929426_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19308684
Total Bases587.7 Mbp
Sequences flagged as poor quality0
Sequence length14-137
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA3422021.772269927872868No Hit
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCC908530.4705292188737461No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACC636010.3293906513773803No Hit
AGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCG543360.2814070601600814No Hit
AAATAGTCGCAAACGACGAAAACT400310.20732122396326957No Hit
ACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCA393560.20382538758208485No Hit
TACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA385570.19968735311013427No Hit
ATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA379380.19648154167316634No Hit
AAGGCTGAGGCGTGATGACGAGGCAC350320.18143131867505832No Hit
TCGACACACTATCATTAACTG324380.16799694893758682No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCAC319620.16553173691174397No Hit
TCGCGCTGTGCGGGTTCAAGTCCCGCTCCGGGTACCA313380.16230003039047095No Hit
TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTG288490.14940945742340597No Hit
GCGGGAATAGCTCAGTTGGTAGAGCACGACCT285970.14810434517443033No Hit
CGGTGGTTCAAGTCCACTCAGGCCTACCA266720.1381347377169775No Hit
AGGGCTTACGGGTTCAAGTCCCGTCCTCGGTACCA266670.13810884263267242No Hit
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCT254430.13176972599479075No Hit
TTCGACACACTATCATTAACTG247620.1282428155124399No Hit
ATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCA233990.12118381553087719No Hit
TTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA217980.11289220953639306No Hit
AAAGGCTGAGGCGTGATGACGAGGCAC214000.1108309608257093No Hit
AAATAGTCGCAAACGACGAAAACTACGC212710.11016286765063844No Hit
ACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACC206820.10711242671950093No Hit
AGGAAAAGCCTCTAAGC201060.1041293130075566No Hit
TAAGGCTGAGGCGTGATGACGAGGCAC197770.10242541646028283No Hit
ACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCA195310.1011513783124733No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)