FastQCFastQC Report
Sat 16 Sept 2023
SRR15929427_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15929427_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15875038
Total Bases504.8 Mbp
Sequences flagged as poor quality0
Sequence length14-135
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA4584022.8875647415773114No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACC666300.41971553075967444No Hit
AGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCG613850.38667623976711113No Hit
TACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA484760.3053598989810292No Hit
AAATAGTCGCAAACGACGAAAACT438350.2761253232905647No Hit
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCC414170.2608938636871294No Hit
TTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCA305380.19236489386671074No Hit
TCGCGCTGTGCGGGTTCAAGTCCCGCTCCGGGTACCA288490.18172554925537818No Hit
ACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCA283960.17887201277880405No Hit
TCGACACACTATCATTAACTG265100.16699172625602535No Hit
ACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCAC257320.16209095058544112No Hit
AGGGCTTACGGGTTCAAGTCCCGTCCTCGGTACCA220180.13869573099604549No Hit
ATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA207550.13073984452824616No Hit
CGGTGGTTCAAGTCCACTCAGGCCTACCA204830.1290264628027977No Hit
TTCGACACACTATCATTAACTG196760.12394301040413258No Hit
AAGGCTGAGGCGTGATGACGAGGCAC196470.12376033367605167No Hit
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCT177420.11176036240039236No Hit
ACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCA176680.11129422178391005No Hit
ATTCCGGCATTCCGAGGTTCGAATCCTCGTACCCCAGCCA176510.11118713542606953No Hit
TTAGTTTGTTAGTGGCGTGTCCGTCCGCAGCTGGCAAGCG175240.11038713734102558No Hit
AAAATAGTCGCAAACGACGAAAACT172060.10838399252965566No Hit
ACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACC170340.10730053055621033No Hit
TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTG164790.10380447593259304No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)