FastQCFastQC Report
Thu 14 Sept 2023
SRR15960257.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15960257.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114800224
Total Bases8.6 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA46733834.070883171795902No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA40714333.5465375050139274No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA28226862.4587809166644137No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAAA13860171.2073295257681729No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA6065640.528364822702785No Hit
GGCGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA5333670.46460449415150973No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGAAAAAAAAAAAA4978770.4336899203262879No Hit
GGTGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA4903470.4271306996752898No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA4776320.416054937314408No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG4465470.3889774640160981No Hit
GGCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG4339310.37798793842074735No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGAAAAAAAAAAAA4250000.37020833687571897No Hit
GGGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA3955090.3445193626103029No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG3753560.32696451881487615No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCAAAAAAAAAAAAA3597680.3133861480967145No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA3557080.30984956963150173No Hit
CGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAAA3135320.27311096535839513No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGAAAAAAAAAAAA2920320.2543827789046823No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCAAAAAAAAAAAAA2871110.2500962019028813No Hit
CGCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG2775880.2418009219215461No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG2757430.24019378220028562No Hit
GCGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA2751530.23967984592085811No Hit
GAGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA2702180.23538107382090126No Hit
GGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAAA2648410.23069728505059361No Hit
CGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAAA2592450.22582273010199005No Hit
GGCCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA2215180.1929595538071424No Hit
GGCCCCCGCCCCTTGCCTCTCGGCGCCCAAAAAAAAAAAAAAAGATCGGA2171970.18919562386916597No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCGAAAAAAAAAA2049800.17855365857125854No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA2046320.1782505232742403No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCAAAAAAAAAAAAA2040280.17772439189665692No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG2004700.1746250948081774No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAA1986770.1730632511657817No Hit
CCGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA1957190.17048660114112668No Hit
GGGAGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAA1879070.16368173637013114No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCGAAAAAAAAAA1866460.16258330645765987No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGAAAAAAAAAAAAA1855850.16165909223313013No Hit
GGGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1831260.15951711034988922No Hit
TTTGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA1821550.15867129318493314No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAAA1712000.14912862887793668No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA1675870.1459814224752732No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCAAAAAAAAAAAAAA1647400.14350146215742576No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAGA1644950.1432880479396974No Hit
GTTGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA1600130.13938387437292804No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCAAAAAAAAAAAA1577310.13739607337351536No Hit
GCGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAAA1575840.13726802484287837No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA1504980.1310955630191105No Hit
CGCCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA1479660.1288899924097709No Hit
CGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAGA1462360.1273830267090768No Hit
CCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG1402350.12215568499239166No Hit
GGTGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAAA1366540.11903635309979882No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCGAAAAAAAAAA1319260.11491789423686141No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA1309960.11410779128793336No Hit
CGCCCCCGCCCCTTGCCTCTCGGCGCCCAAAAAAAAAAAAAAAGATCGGA1302810.11348497020354247No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA1217410.10604596032843978No Hit
GGGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGATC1166980.10165311175699449No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)