FastQCFastQC Report
Thu 7 Sept 2023
SRR15960258.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15960258.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97174828
Total Bases7.2 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA8068590.8303168800051799No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA6906730.7107529945923856No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA6820970.7019276638184531No Hit
GCGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA5605640.5768613246220513No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA5500820.5660745805487816No Hit
CGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAAA5289300.5443076266623287No Hit
GGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAAA5140930.5290392693054213No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA4761540.4899972655469995No Hit
GGCCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA4698010.4834595642402372No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAA4419070.45475459961709425No Hit
CCGCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA4004040.4120449793849905No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA3835580.39470921420102745No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG3782620.38925924314473703No Hit
CGCCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA3178420.3270826473703663No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG3126390.32172838011094806No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA2545420.26194232111221233No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCAAAAAAAAAAAA2413280.24834414937168706No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG2409410.2479458980879287No Hit
GCGGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAAA2299650.23665079191084343No Hit
CCGGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAAA2156160.22188462221924385No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA2044960.2104413295179694No Hit
GGCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG1968600.20258332744360505No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA1700370.17498050009411903No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG1698820.17482099376599874No Hit
GGGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1619960.16670572342047263No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAA1565400.1610911006706387No Hit
GGCCCCCGCCCCTTGCCTCTCGGCGCCCAAAAAAAAAAAAAAAGATCGGA1479170.15221740346172777No Hit
GGGCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCAAAAAAAAAAAA1391650.14321095582489737No Hit
GCCCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAA1386180.14264805284759546No Hit
GCCCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1383740.1423969590149416No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAGA1324680.13631925337701653No Hit
CCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG1239900.1275947717653794No Hit
CGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAGA1239720.12757624844985577No Hit
CGCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG1187520.1222044869479985No Hit
GGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAAA1183140.12175375293692313No Hit
GCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGAAAAAAAAAAAAAAA1130380.11632436334232565No Hit
GGGCGAGGTGCGTGGCGGGGGCGGGCGGGCGTCCCGCGCAAAAAAAAAAA1103770.11358599986408002No Hit
GCGCGTCCCCGCTCGGCGGGGTCCCCGCGTCGAAAAAAAAAAAAAAAGAT1082760.11142391731323671No Hit
GGGGGGCCCGGTGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAGATC1078740.11101022993320862No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCCGCGAAAAAAAAAA1065340.10963127199978166No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA1055170.1085847046726957No Hit
GGCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1008980.10383141609471126No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)