FastQCFastQC Report
Thu 14 Sept 2023
SRR16077415_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16077415_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22103262
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length85
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGACCGGGGTCCGGTGCGGAGAGCCGTTCAAAAAAAAAAAAAAAAAAAA2973921.3454665650708026No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAAA2737091.238319484246262No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAAAA1891770.8558781957160894No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAAA1546840.6998243064756686No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAAA1487310.6728916302037229No Hit
GCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAAAA1463960.662327578617129No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGAAAAAAAAAAAAAAA1175960.5320300686839797No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAAAG1136850.5143358478038219No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAAA1015470.4594208764299134No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAA1009190.4565796668383156No Hit
GGGACCGGGGTCCGGTGCGGAGAGCCGTTCAAAAAAAAAAAAAAAAAAAG888900.4021578353457512No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTTCAAAAAAAAAAAAAAAAAAA827820.37452390511409583No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAAAAAAA819710.3708547634281311No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAAAA718820.3252099169796747No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA689050.31174131673415445No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAAGA622120.28146071833198194No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAAGA607240.27472868031876924No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAAA606510.27439841232484147No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAAAAA600190.271539105856864No Hit
GGGACCGGGGTCCGGTGCGGAGAGCCGTTCGAAAAAAAAAAAAAAAAAAA544640.24640706878468888No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAAA476210.21544783751828123No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAA459650.20795573069712514No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAA456070.2063360602611506No Hit
GGGACCGGGGTCCGGTGCGGAGAGCCGTTCGTAAAAAAAAAAAAAAAAAA408270.18471029298752373No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAAAG395850.1790912128716567No Hit
GGGACCGGGGTCCGGTGCGGAGAGCCGTTAAAAAAAAAAAAAAAAAAAAG358500.16219325455220138No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG354530.16039713957152568No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAAG352000.15925251214051572No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAAAAAAA341400.15445683989992065No Hit
GGGACCGGGGTCCGGTGCGGAGAGCCGTTAAAAAAAAAAAAAAAAAAAAA341100.15432111332707363No Hit
GGGACCGGGGTCCGGTGCGGAGAGCCGTCCAAAAAAAAAAAAAAAAAAAA307160.1389659137189796No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAAAAAAG286850.1297772247372356No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA277730.12565113692268587No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAA266880.12074235920471829No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAAAAAA263390.11916340674059783No Hit
GGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAAG261010.1180866425960114No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAA258160.11679724015396462No Hit
GTCGCGGCGTGGGAAATGTGGCGTACGGAAAAAAAAAAAAAAAAAAAAGA243440.11013758964627031No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAAAT241260.1091513098835819No Hit
CGGGACCGGGGTCCGGTGCGGAGAGCCGTTAAAAAAAAAAAAAAAAAAAA233330.10556360414132539No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCACAAAAAAAAAAAAAAAAAAA228740.10348698757676582No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAAAAAAA225750.10213424606739041No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)