FastQCFastQC Report
Sat 16 Sept 2023
SRR16299883.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16299883.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17978689
Total Bases916.9 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA11049196.1457150741080175No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA9351415.20138592975272No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA9141265.084497540393518No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7940674.4167124755314475No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7882234.384207324571887No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7520894.1832249281357505No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA6398923.559169414410584No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA5918583.291997542201214No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA2235551.243444391301279No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1614840.8981967483836001No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1605440.8929683360115969No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1592890.8859878492808902No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1573240.8750582425670749No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1542030.8576988010638595No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1121980.6240610758659878No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1034720.5755258350594974No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA823300.45793105381599297No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA727140.40444550767856324No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA592440.3295234708159199No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA588620.32739873302219086No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA576180.3204794298405184No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA563450.3133988245750288No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA561570.31235314210062814No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA540460.30061146282690576No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA528200.29379227818001635No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA522970.29088327853048684No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA522940.29086659210802296No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA492460.2739131868847612No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA399310.22210184513453676No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA373230.20759578187263822No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA372680.2072898641274678No Hit
CCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA370980.2063443001878502No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA358440.19936937559796492No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA348930.19407977967692752No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA339950.18908497721941794No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA296630.16498978318163243No Hit
CGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAA278630.1549779297033282No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA266750.14837010640764742No Hit
GGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA265800.1478417030296258No Hit
CGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA265710.14779164376223428No Hit
GCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA264640.1471964946943573No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA257870.14343092535835067No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA254290.14143967894433238No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA252010.1401715108370805No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA251480.13987671737355267No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA251390.13982665810616113No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA239020.1329462899102376No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA228050.1268446214292933No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA221200.12303455496671643No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACCAAAAAAAAAAAA214840.11949703340438227No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA209660.11661584445895916No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA208420.11592613899712041No Hit
GGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA204960.1140016382729575No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA197060.1096075470241462No Hit
CGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA183760.10220989973184363No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA182940.10175380418449866No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA182210.10134776790454521No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA180920.10063025173860007No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)