FastQCFastQC Report
Sat 16 Sept 2023
SRR16299884.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16299884.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19275785
Total Bases983 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA10876755.642701451588093No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA10025385.201022941478129No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA9968375.1714469734955015No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7872994.084393968909697No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7841804.068213045538742No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7566283.925277232548506No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA6708373.4802058645082417No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA6576413.4117469145873955No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1055450.547552278675032No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA870310.45150430968181066No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA853310.4426849542054967No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA763130.3959008673317326No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA759950.39425112907204557No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA730810.379133716214411No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA578960.3003561203862774No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA575140.29837435933218803No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA468120.24285392268071057No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA437930.2271917849260095No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA429540.22283917360564043No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA342790.1778345213956267No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA340650.17672432017684364No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA337460.17506939406099414No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA328150.17023949997367163No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA294650.15286018182917063No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA288450.14964371100839732No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA282270.14643761589994908No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA281900.1462456652219352No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA273240.14175298178517762No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA256920.13328640052791627No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA245250.12723217238623485No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA240930.12499101852401862No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA239330.12416096153801258No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA238920.12394825943534855No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA235990.12242821757972504No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA221700.1150147711234588No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA221340.11482800830160743No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA202810.10521491083242523No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA202560.1050852144283618No Hit
CCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA197450.1024342199293051No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA193770.10052508886149124No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA193470.10036945317661511No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)