FastQCFastQC Report
Sat 16 Sept 2023
SRR16299885.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16299885.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19922835
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA13297236.6743663740627275No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA12129056.088014080325416No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA11447915.7461249867300515No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA9701614.869593107607426No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA9645254.841303961007557No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA9020414.527673897816249No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7692543.861167348923986No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA7644963.8372852056446782No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1808010.9075063865157745No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1512790.7593246643863687No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1419920.7127098126345974No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1320240.6626767726581081No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1316740.660919994569046No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA1221770.6132510759638374No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA969400.4865773370105208No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAA952880.4782853444301476No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA523650.2628390989535375No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA486050.24396628291104153No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA472300.23706465470401172No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA453430.22759311112098254No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA450290.22601703020679537No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA428680.2151701803483289No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA421520.21157631431470472No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA395870.19870164060486373No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA387870.19468614782986457No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA385610.1935517711209273No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA383910.19269847890623998No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA373400.18742312527308486No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA354150.17776084578324322No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA353160.17726392855233705No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA351420.17639055887377475No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA345480.17340905548833788No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA335400.16834953459183896No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA333600.16744604871746416No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA326820.16404291859065237No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA316840.15903359135384096No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA305460.1533215528814047No Hit
GCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA294510.14782534714562462No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA290850.1459882592010625No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA285810.14345849875281305No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA283410.14225385092031329No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACTAAAAAAAAAAAA282160.14162643017421966No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA282150.14162141080825094No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACAAAAAAAAAAAAAAA280370.14072796366581364No Hit
CGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA266250.13364061891794013No Hit
GGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA257010.12900272476281613No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA252810.12689459105594159No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACGAAAAAAAAAAAA251660.12631736396953547No Hit
CCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA241490.12121266877931781No Hit
CCCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA215210.10802177501344563No Hit
CGGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA215040.10793644579197689No Hit
GGCTCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAAAAA212040.10643063600135222No Hit
GCGTCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAAAAAAAGA210880.10584838954897735No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)