FastQCFastQC Report
Mon 18 Sept 2023
SRR16584059.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16584059.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences951265
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length1-140969
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGCCAGTAGTCATCGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG19980.2100361098116718No Hit
CCTGCCAGTAGTCAACTCGCTTGTCTCAAAGATTAAGCCATGCATGTCTA19950.20972074027742005No Hit
AGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGA14070.14790831156407522No Hit
CAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAG11710.12309924153627012No Hit
CCTGCCAGTAGTCATCGCTTGTCAAAGATTAAGCCATGCATGTCTAAGTA11440.12026091572800428No Hit
CCTGCCAGTAGTCAACTCGCTTGTCAAAGATTAAGCCATGCATGTCTAAG11270.11847382170057764No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)