FastQCFastQC Report
Mon 18 Sept 2023
SRR16584061.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16584061.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences430437
Total Bases662 Mbp
Sequences flagged as poor quality0
Sequence length1-65731
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGC34800.8084806835843573No Hit
TGACCTCAAATCAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAG18560.43118969791165723No Hit
TGGTTGATCCTGCCAGTAGTCATATGCTTGTCAAAGATTAAGCCATGCAT15810.367301138145652No Hit
TGGTTGATCCTGCCAGTAGTCATATGCTTGTTCAAAGATTAAGCCATGCA10600.24626135764351112No Hit
GACCTCAAATCAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGC9550.22186754391467275No Hit
ACTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCAT6650.15449415361597632No Hit
TGGTTGATCCTGCCAGTAGTCATATGCTTGTCTAAAGATTAAGCCATGCA5750.13358517041982915No Hit
ATTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCAT5580.12963569581611248No Hit
TGACCTCAAATCAGGTGGGAGTACCCGCTGAACTTAAGCATATCAATAAG4860.11290850925919473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)