FastQCFastQC Report
Mon 18 Sept 2023
SRR16584062.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16584062.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1506
Total Bases2.6 Mbp
Sequences flagged as poor quality0
Sequence length8-3748
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGCCAGTAGTCATCGCTTGTCAAAGATTAAGCCATGCATGTCTAAGTA30.199203187250996No Hit
AGGTAGGAGTACCCGTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAA30.199203187250996No Hit
CCTGCCAGTAGTCAACTCGCTTGTCAAAGATTAAGCCATGCATGTCTAAG30.199203187250996No Hit
CCTGCCAGTAGTCAACTTGCTTGTCAAAGATTAAGCCATGCATGTCTAAG30.199203187250996No Hit
CAGGTGGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAG20.13280212483399734No Hit
GAGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGA20.13280212483399734No Hit
CCTGCCAGTAGTCAACTGCTTGTCAAAGATTAAGCCATGCATGTCTAAGT20.13280212483399734No Hit
CAGGTAGGAGTACCCGTGAACTTAAGCATATCAATAAGCGGAGGAAAAGA20.13280212483399734No Hit
AGGTAGGAGTACCCGCTGAACTTAGCATATCAATAAGCGGAGGAAAAGAA20.13280212483399734No Hit
CCTGCCAGTAGTCATCGCTTGTCAAGATTAAGCCATGCATGTCTAAGTAT20.13280212483399734No Hit
CTGCCAGTAGTCATCGCTTGTCAAAGATTAAGCCATGCATGTCTAAGTAT20.13280212483399734No Hit
AGGTGGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAGAA20.13280212483399734No Hit
CCTGCCAGTAGTCTTATCGCTTGTACCAAAGATTGCCATGCATGTCTAAG20.13280212483399734No Hit
CCTGCCAGTAGTCAACTCGCTTGTACCAAAGATTAAGCCATGCATGTCTA20.13280212483399734No Hit
CCTGCCAGTAGTCAACTCGCTTGTCTAAAGATTAAGCCATGCATGTCTAA20.13280212483399734No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)