FastQCFastQC Report
Mon 18 Sept 2023
SRR16584073.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16584073.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18714
Total Bases29.5 Mbp
Sequences flagged as poor quality0
Sequence length1-19845
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGA640.3419899540450999No Hit
CCTGCCAGTAGTCAACTCGCTTGTCTCAAAGATTAAGCCATGCATGTCTA400.21374372127818744No Hit
CAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAG380.20305653521427808No Hit
CCTGCCAGTAGTCAACTCGCTTGTCAAAGATTAAGCCATGCATGTCTAAG320.17099497702254995No Hit
CCTGCCAGTAGTCATCGCTTGTCAAAGATTAAGCCATGCATGTCTAAGTA240.12824623276691247No Hit
TCAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA220.1175590467030031No Hit
CCTGCCAGTAGTCATCGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG220.1175590467030031No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)