FastQCFastQC Report
Mon 18 Sept 2023
SRR16584075.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16584075.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13676
Total Bases23.1 Mbp
Sequences flagged as poor quality0
Sequence length1-7522
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGA470.3436677391050015No Hit
TCAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAA400.2924831822170225No Hit
CCTGCCAGTAGTCATCGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG390.28517110266159695No Hit
CAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAG310.22667446621819246No Hit
CCTGCCAGTAGTCAACTCGCTTGTCTCAAAGATTAAGCCATGCATGTCTA280.20473822755191579No Hit
CCTGCCAGTAGTCAACTCGCTTGTCAAAGATTAAGCCATGCATGTCTAAG190.1389295115530857No Hit
CCTGCCAGTAGTCAACATGCTTGTCTCAAAGATTAAGCCATGCATGTCTA180.13161743199766013No Hit
CCTGCCAGTAGTCATCGCTTGTCAAAGATTAAGCCATGCATGTCTAAGTA160.11699327288680901No Hit
AGGTGGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGA150.10968119333138344No Hit
CCTGCCAGTAGTCATCGCTTGTCTAAAGATTAAGCCATGCATGTCTAAGT150.10968119333138344No Hit
AGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAGAA140.10236911377595789No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)