FastQCFastQC Report
Mon 18 Sept 2023
SRR16584076.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16584076.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17215
Total Bases25.7 Mbp
Sequences flagged as poor quality0
Sequence length1-37006
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGA430.24978216671507408No Hit
CAGGTAGGAGTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAG350.20331106593087425No Hit
CCTGCCAGTAGTCAACTCGCTTGTCTCAAAGATTAAGCCATGCATGTCTA280.1626488527446994No Hit
CCTGCCAGTAGTCAACTCGCTTGTCAAAGATTAAGCCATGCATGTCTAAG250.14522218995062444No Hit
CCTGCCAGTAGTCATCGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG210.12198663955852454No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)