FastQCFastQC Report
Tue 19 Sept 2023
SRR16633436_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16633436_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84893035
Total Bases6.3 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAGTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGA1061530.12504323823503305No Hit
GATGGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCC947280.11158512591757382No Hit
TTCCTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGA934220.1100467193804533No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)