FastQCFastQC Report
Sun 10 Sept 2023
SRR16633446_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16633446_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences148862592
Total Bases11 Gbp
Sequences flagged as poor quality0
Sequence length35-75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCAAAGATCGATTTATTATAGCCGGGACACTTCAGAACGGACTCTCCCG2416360.1623215051905048No Hit
CTCAGATCTGCATGTGTTGTATAACACTGGCAAGAAAAGTTCCCGTTTGC1754300.11784693363393807No Hit
CCGCAAAGATCGATTTATTATAGCCGGGACACTTCAGAACGGACTCTCCC1723050.1157476822652665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)