FastQCFastQC Report
Tue 19 Sept 2023
SRR16633450_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16633450_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122564001
Total Bases6 Gbp
Sequences flagged as poor quality0
Sequence length35-50
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCAAAGATCGATTTATTATAGCCGGGACACTTCAGAACGGACTCTCCC1493490.12185388758645371No Hit
CGCAAAGATCGATTTATTATAGCCGGGACACTTCAGAACGGACTCTCCCG1292990.10549508741967391No Hit
CTCAGATCTGCATGTGTTGTATAACACTGGCAAGAAAAGTTCCCGTTTGC1279070.1043593542609628No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)