FastQCFastQC Report
Tue 19 Sept 2023
SRR16796955_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16796955_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71722693
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length10-67
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT43229936.027371281220575No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC6466870.9016490777890898No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGC6142490.8564221089690538No Hit
TGGCGCGGCGCGGGAAATGTGGCGTACG5907080.8235998612043192No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGCC5533820.7715577550887556No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGCCCGGGG5228310.7289617527328485No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC4022500.5608406254349653No Hit
CGCCGTCGGGCCCGGGGGGCCGGTCACGCCG3877220.5405848327530033No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG3308570.4613003028204755No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT3008180.4194181609996156No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT2883480.40203175304641725No Hit
AGGGCTTCTGTCGTGAGTGGCACACGTAGG2630440.3667514269158856No Hit
ACGCGGCGCTCCCCCGGGGAGGGGGGAGGAC2197010.3063200652546607No Hit
TGGCGCGGCGCGGGAAATGTGGCGTACGG2111110.29434338166861634No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2091770.2916468850381845No Hit
GGCCGCCGGTGAAATACCACTACTCTCAT2017690.28131821542172153No Hit
TGGCGCGGCGCGGGAAATGTGGCGTACGGA2010330.28029204090259136No Hit
AAGCCGCCGTGGCGCAATGAAGGTGAAGGGCC1796140.2504284104335011No Hit
AGCCGCCGTGGCGCAATGAAGGTGAAGGGCC1731910.24147308579168936No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCG1704120.23759844042665826No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGA1663890.23198933704287988No Hit
CGTGATCGTATAGTGGTTAGTACTCTGC1410110.19660583575689217No Hit
TGGCGCGGCGCGGGAAATGTGGCGTACGGAA1308420.18242761743483335No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCT1150560.16041784711011897No Hit
GGCCGCCGGTGAAATACCACTACTCTCA1149460.16026447863579243No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCC1060860.1479113451582193No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1045910.14582692816623605No Hit
AGCCGCCGTGGCGCAATGAAGGTGAAGGGC1001340.1396127164382966No Hit
AAGCCGCCGTGGCGCAATGAAGGTGAAGGGC986270.13751156834002315No Hit
AAAGCCGCCGTGGCGCAATGAAGGTGAAGGGCC968450.13502699905593338No Hit
AAAGCCGCCGTGGCGCAATGAAGGTGAAGGGC936630.13059046737132415No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCGC931560.12988357813056461No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA898450.12526718705333612No Hit
AGTCAGCGGAGGAAAAGAAACT851210.11868070821044044No Hit
TGGCGCGGCGCGGGAAATGTGGCGTAC849230.1184046449566527No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT831430.11592286419027796No Hit
GGGCTTCTGTCGTGAGTGGCACACGTAGG825620.11511279979406239No Hit
AAGTCCCTGCCCTTTGT794970.11083939639578229No Hit
GGCGGAAGCCGAGCGCACGGGGTCGGCGGCGA756850.10552448163093932No Hit
AAACTCTAAGGAGAGGGTATCAAGCACATTAT732360.10210994168888779No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)