FastQCFastQC Report
Tue 19 Sept 2023
SRR16902782_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16902782_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50989112
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length10-34
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC32650736.403470999847967No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCCG20803724.0800318311093555No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT20769764.073371585682842No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC15299713.0005837324642957No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC13936362.7332031199131297No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC12463842.444412054087155No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG10777092.1136061361492233No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT8707871.7077900866365352No Hit
CGGTTGGCCCCGGATAGCCGGGTCCC6702711.314537503614497No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCCG6152611.2066517259606324No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCCGT4458740.8744494314786263No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGA4142530.8124342310570147No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA3785950.7425016540786198No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3280490.6433706866673811No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCCCG3272470.6417978018522856No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC3146190.6170317302250723No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCG3117630.6114305344246826No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCC3031790.5945955677753322No Hit
TCGCTTCTGGCGCCAAGCGTCCG2999730.5883079509209731No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC2836760.55634622544515No Hit
GGCCCGAGGTGGGATCCCGAGGCCT2793960.5479522765566107No Hit
GGGCCCGAGGTGGGATCCCGAGGCCT2577240.5054490848948301No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2563870.5028269564686673No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC2537850.49772390623315815No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG2391040.468931484823662No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2230830.43751105137896895No Hit
AGCCGAGCGCACGGGGTCGGCGGCGA2094490.41077200952234666No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC2024560.3970573168640395No Hit
ACCCCGAGTGTTACAGCCCTCCGG2012070.3946077743028747No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCC1984640.3892281944427666No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG1975530.3874415384994349No Hit
GGTTGGCCCCGGATAGCCGGGTCCC1916100.3757861090030358No Hit
TGGCCCGAGGTGGGATCCCGAGGCCT1888410.3703555378646327No Hit
GGCCCGAGGTGGGATCCCGAGGCC1865520.36586634417167335No Hit
CGAAGCCGAGCGCACGGGGTCGGCGGCGA1785510.35017475887793453No Hit
GGGCCCGAGGTGGGATCCCGAGGCC1560890.3061222168371946No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1509560.2960553617799816No Hit
GCCGAGCGCACGGGGTCGGCGGCGA1490180.2922545503440029No Hit
CGCTTCTGGCGCCAAGCGTCCG1459920.2863199500316852No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGC1400550.27467628775335406No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCG1383560.27134420383708585No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG1382820.2711990748142466No Hit
CGGTTGGCCCCGGATAGCCGGGTCC1361340.2669864107458863No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCCGT1322720.25941224471608765No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1312140.2573372919300889No Hit
GGTTGGCCCCGGATAGCCGGGTCCCCG1309040.25672931899657325No Hit
GTTGGCCCCGGATAGCCGGGTCCC1246840.2445306362660326No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGCGC1230270.24128092287624073No Hit
CTCGCTTCTGGCGCCAAGCGTCCG1227950.24082592377760964No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1210010.23730752557526402No Hit
CGGTTGGCCCCGGATAGCCGGGT1186310.23265947443838597No Hit
TGGCCCGAGGTGGGATCCCGAGGCC1185920.23258298752094367No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC1180550.2315298215038536No Hit
AAGCCGAGCGCACGGGGTCGGCGGCGA1176560.23074730150232856No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC1124740.22058434749755987No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCC1066080.20907993063303396No Hit
AACGATGCCGACTGGCGATGCGGCGGCG1009560.197995211212935No Hit
GACGAAGCCGAGCGCACGGGGTCGGCGGCGA1008410.19776967286663083No Hit
CCGAGCGCACGGGGTCGGCGGCGA961030.1884774929988975No Hit
GGGGCCCGAGGTGGGATCCCGAGGCCT955570.18740667615470535No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC917370.17991488065138297No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG870770.17077567461853424No Hit
GCCCGAGGTGGGATCCCGAGGCCT870370.1706972264980806No Hit
GGCCCGAGGTGGGATCCCGAGGC836440.16404286468060084No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC817870.16040091068854073No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCC798860.15667266376398162No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGCG792990.15552143759632447No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCC774870.15196773773977473No Hit
CCGACGAAGCCGAGCGCACGGGGTCGGCGGCGA773890.1517755398446633No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGG769030.1508223951811516No Hit
TGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC762800.14960056570508623No Hit
GGGCCCGAGGTGGGATCCCGAGGC761290.14930442405037375No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG716380.14049666132644162No Hit
GAAGCCGAGCGCACGGGGTCGGCGGCGA714800.14018679125064976No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTC696000.1364997295893288No Hit
ACGATGCCGACTGGCGATGCGGCGGCG679410.13324609379351418No Hit
GTTGGCCCCGGATAGCCGGGTCCCCG666100.1306357325854194No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGC665450.13050825438968225No Hit
CGAAGCCGAGCGCACGGGGTCGGCGGCG662840.12999638040372227No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCC646000.12669371453262412No Hit
GAGGGCGCACCACCGGCCCGTCTCGC641100.1257327250570671No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCCCGT638710.1252639975373566No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGCGCG603710.11839978699766335No Hit
AACGATGCCGACTGGCGATGCGGCGGCGTT600590.11778789165812498No Hit
GGGGCCCGAGGTGGGATCCCGAGGCC597300.1171426558673938No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCGT591850.11607380022621301No Hit
AGCCGAGCGCACGGGGTCGGCGGCG589430.1155991890974685No Hit
GTGGGGGGGCCCAAGTCCTTCTGATCGAGGCC577170.1131947542055645No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCCGG552400.10833685434647301No Hit
TCGCTTCTGGCGCCAAGCGTCC544850.10685614607291063No Hit
GCCCGAGGTGGGATCCCGAGGCC537570.10542839028065441No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT533800.1046890167453789No Hit
GGTTGGCCCCGGATAGCCGGGT518370.10166288049887984No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)