FastQCFastQC Report
Tue 19 Sept 2023
SRR16902783_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16902783_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149726702
Total Bases2.9 Gbp
Sequences flagged as poor quality0
Sequence length10-37
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGCCCCGGATAGCCGGGTCCC25010221.670391430915242No Hit
TTGGCCCCGGATAGCCGGGT23592371.5756955629731295No Hit
ACCGGCCCGTCTCG19113311.2765465174007506No Hit
AGGAATAATGGAAT17165761.1464728582614476No Hit
CGGTTGGCCCCGGATAGCCGGGT16054251.0722369347319225No Hit
GTTGGCCCCGGATAGCCGGGTCCC12419160.8294552564177897No Hit
TCGGTTGGCCCCGGATAGCCGGGT12233680.8170673524886697No Hit
TCGCTTCTGGCGCCAAGCGT11531570.7701745811511964No Hit
GTTGGCCCCGGATAGCCGGGT11073830.7396028799191743No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCCG10636740.7104103582005032No Hit
ACCGGCCCGTCTCGC10606640.7084000287403646No Hit
CGGTTGGCCCCGGATAGCCGGGTCCC9667520.6456777495840388No Hit
AACCTCGGGCCGATCGCAC9373770.6260586705502936No Hit
ACCACCGGCCCGTCTCG9371160.6258843529459428No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCC8822150.5892168786299721No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCCG8647660.5775629787130421No Hit
GGTTGGCCCCGGATAGCCGGGT8254920.551332520501253No Hit
AGCCGGGTCCC7552190.5043983403842022No Hit
AGACGACCTGCTT7297040.4873572918209339No Hit
TGGCCCCGGATAGCCGGGT7034800.46984271382668935No Hit
TCCGGTGCGGAGAGCCGTT6392740.4269605831563698No Hit
ACCCTACGCCGGCAGGCGCGGGT6055690.4044495683876079No Hit
ACCACCGGCCCGTCTCGC5508610.3679109955951611No Hit
TTCGGTTGGCCCCGGATAGCCGGGT5311960.3547770657501025No Hit
TTGGCCCCGGATAGCCGGGTCC5287570.35314809779220274No Hit
TCCGGTGCGGAGAGCCGT5153350.3441837648971925No Hit
ACGGGGTCGGCGGCGA4879850.3259171500351354No Hit
GGTTGGCCCCGGATAGCCGGGTCCC4845100.32359625472816467No Hit
TCGCTTCTGGCGCCAAGCGTCCG4828490.32248690016560977No Hit
AGCTAGGAATAATGGAAT4656160.3109772630936598No Hit
TCGCTTCTGGCGCCAAGCG4496090.30028645124368No Hit
ACTTCGAACGCA4419600.29517781003417815No Hit
ATGACTGAAC4068720.27174311232741905No Hit
TCCGGTGCGGAGAGCCGTTC4021720.26860405968201984No Hit
TGGCCCCGGATAGCCGGGTCCC3972900.26534345223205413No Hit
TTACCCTACGCCGGCAGGCGCGGGTA3837190.25627960468934924No Hit
TCCGGTGCGGAGAGCCG3816680.25490977554558036No Hit
AGCCGGGTCCCCG3658570.2443498688697491No Hit
ACCCTACGCCGGCAGGCGCGGGTA3636280.24286115645557999No Hit
TCGGGCCGATCGCAC3632730.24262405779832108No Hit
AAATGGAATA3622640.24195016330487265No Hit
ATTTATCAGA3397570.22691810843465982No Hit
CTCGGTTGGCCCCGGATAGCCGGGT3385620.22611998760247853No Hit
CTGGATTGAGGCTCCAGT3341060.22314389854122346No Hit
GTCCGGTGCGGAGAGCCGTT3336630.22284802613230606No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG3330270.22242325219986478No Hit
GTCCGGTGCGGAGAGCCGT3287760.21958407926463247No Hit
TCGGGGCTACGCCTGTCTGAGCGTCGCT3237760.21624466155676092No Hit
AGGAATAATGGAA3230740.21577580731057577No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCC3227790.21557878166581138No Hit
AGATAACCTCGGGCCGATCGCAC3138740.20963127872809217No Hit
TAGGAATAATGGAAT3138710.20962927507746748No Hit
TTACCCTACGCCGGCAGGCGCGGGT3085660.20608615288941584No Hit
AAATTCTAGAGCT3011120.20110774897052094No Hit
ATCGACACTTCGAACGCA2930430.19571859667355793No Hit
ATGTTAGGGATAACAGG2917340.19484433711763718No Hit
TTGGCCCCGGATAGCCGGGTCCCCG2897720.1935339496090684No Hit
CGGGCCGATCGCAC2849560.19031742247284655No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCCCG2783210.18588601517450107No Hit
GTTGGCCCCGGATAGCCGGGTCC2748670.18357914542190343No Hit
ACGATGCCGACTGGCGATGCGGCGGCG2682190.17913905563751747No Hit
AACCTCGGGCCGATCGCA2547420.17013798914772063No Hit
ACCCTACGCCGGCAGGCGCGGG2541970.16977399261756265No Hit
ACGCGACCCC2524020.16857514166043677No Hit
AAATACATGC2520560.16834405395505206No Hit
ACGGGGTCGGCGGCG2454710.16394604083378528No Hit
CGCTTCTGGCGCCAAGCGT2348190.15683174534893582No Hit
CGGTTGGCCCCGGATAGCCGGGTCC2298250.15349633494231377No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC2267930.15147131204426048No Hit
TCGCTTCTGGCGCCAAGCGTCC2229620.14891265019648933No Hit
TAACCTCGGGCCGATCGCAC2205290.14728768953983906No Hit
CGGTTGGCCCCGGATAGCCGGG2165740.1446462101329127No Hit
CCGGGGCTACGCCTGTCTGAGCGTCGCT2157980.14412793250465106No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCC2149070.14353284826910834No Hit
AAGTGCGGGT2137160.14273739897109333No Hit
ACGCCTGTCTGAGCGTCGCT2101870.14038043795287763No Hit
TCGCTTCTGGCGCCAAGC2081940.13904934605452005No Hit
CGGCCCGTCTCG2028310.1354674866210571No Hit
ACCGGGGTCCGGTGCGGAGAGCCGTT1991180.1329876350311917No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCC1977320.13206194844256972No Hit
ATGCTTAGATG1951840.1303601811786384No Hit
TTGGCCCCGGATAGCCGGGTC1933560.12913929006464056No Hit
TACCCTACGCCGGCAGGCGCGGGTA1925560.12860498323138111No Hit
ACCCTACGCCGGCAGGCGCGG1897270.12671554069226745No Hit
ACGCCGGCAGGCGCGGGT1893810.1264844529868827No Hit
ACTTCGAACG1891420.12632482882044646No Hit
CCTCGGTTGGCCCCGGATAGCCGGGT1859380.1241849299532424No Hit
ACCGGCCCGTCTC1834890.12254928315992694No Hit
TCGCTTCTGGCGCCAAGCGTC1818150.12143124611133156No Hit
TTGGCCCCGGATAGCCGGG1807930.12074866913184264No Hit
ATTGATCATCGACACTTCGAACG1801760.12033658498669128No Hit
ATAACCTCGGGCCGATCGCAC1801720.120333913452525No Hit
AGCCGGGTCC1792120.11969274525261366No Hit
TCGGTTGGCCCCGGATAGCCGGGTCC1739300.11616498438601822No Hit
GTCCGGTGCGGAGAGCCGTTC1737830.11606680550540678No Hit
TAGCCGGGTCCC1715400.11456874272165563No Hit
CCGGGGTCCGGTGCGGAGAGCCGTT1694030.11314147559331135No Hit
CTCGGGCCGATCGCAC1649750.11018408727122032No Hit
TGGCCCGAGGTGGGATCCCGAGGCCT1570230.10487307734862149No Hit
AAGTGCGGGTC1568820.10477890576925952No Hit
AGGATGGCCGAGCGG1556350.10394605499291637No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1549610.10349590148589528No Hit
TTTGGCCCCGGATAGCCGGGT1547730.10337033938007932No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1543420.10308248157366079No Hit
TACCCTACGCCGGCAGGCGCGGGT1532770.10237118560188416No Hit
ATGTTAGGGATAACAGGGTAATGCGA1511560.10095460461020506No Hit
ACCGGGGTCCGGTGCGGAGAGCCG1499500.10014913705906647No Hit

[OK]Adapter Content

Adapter graph