FastQCFastQC Report
Fri 29 Sept 2023
SRR16929292.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16929292.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1338613
Total Bases41.9 Mbp
Sequences flagged as poor quality0
Sequence length20-66
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCTGTGGTCTAGTGGTTAGGATTCGGCG21605516.14021378845118No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCG999067.463396814463927No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGG822726.146063126534704No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGGC483613.612769336619322No Hit
GCGCGTTACATCTGGAGTACGATAC198921.4860157491373533No Hit
TCCCTGTGGTCTAGTGGTTAGGATT163001.2176782983580765No Hit
TCCCTGTGGTCTAGTGGTTAGGATTC129700.968913345380629No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGGCGC115860.8655227463053176No Hit
TCCTGTGGTCTAGTGGTTAGGATTCGGCG50700.37875024372242017No Hit
CCCCACAACCGCGCTTGACTAGCTTGCTGTTT42450.31711928690368313No Hit
GCATTGTGGTTCAGTGGTAGAATTCTCGC35270.2634816784238611No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAACCA31990.23897870407653293No Hit
TCCCTGGTCTAGTGGTTAGGATTCGGCG25670.19176565594387623No Hit
ATGTGTGACTGAAAGGTATTTTCTGAGC25020.18690988358846058No Hit
TCCTGTGGTCTAGTGGTTAGGATTCG23360.17450898803462986No Hit
AGCAGAGTGCGCAGCGGAAGCGTGCTGGG20620.15404003995180088No Hit
GCATTGTGGTTCAGTGGTAGAATTCTCG18870.14096680668722028No Hit
TCCTGTGGTCTAGTGGTTAGGATTCGG18410.13753041394338766No Hit
GGTCCGTCCGGTCTTCTAATGAACTAGCGAACGAA17800.13297345834830532No Hit
GGCGCGTTACATCTGGAGTACGATAC17420.13013469912513922No Hit
GCGCGTTACATCTGGAGTACGATA17020.12714653152180652No Hit
CGCGCGGCGGCGGCGGCGGGCGGCGGAGGGGC16320.1219172382159743No Hit
TCCCTGGTGGTCTAGTGTTAGGATTCGGCG14550.10869459657122707No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGGCATTGGTGG13440.10040243147197883No Hit

[OK]Adapter Content

Adapter graph