FastQCFastQC Report
Fri 29 Sept 2023
SRR16929295.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16929295.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1289238
Total Bases41.3 Mbp
Sequences flagged as poor quality0
Sequence length20-65
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCTGTGGTCTAGTGGTTAGGATTCGGCG812436.301629334537146No Hit
GCGCGTTACATCTGGAGTACGATAC669195.1905854465971375No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCG602374.672294797391948No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGG401103.111140068784817No Hit
GGTCCGTCCGGTCTTCTAATGAACTAGCGAACGAA248331.9261765476971666No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGGC248291.92586628690746No Hit
TCCCTGTGGTCTAGTGGTTAGGATT153051.1871353466155978No Hit
GGTCCGTCCGGTCTTCTAATGAACTAGCGAACGA146151.1336153603911767No Hit
TCCCTGTGGTCTAGTGGTTAGGATTC120190.9322561078714714No Hit
GCGCGTTACATCTGGAGTACGAT78970.6125323640786263No Hit
GGCGCGTTACATCTGGAGTACGATAC48940.37960407620625514No Hit
GCGCGTTACATCTGGAGTACGATA45630.35392999585801843No Hit
ATGTGTGACTGAAAGGTATTTTCTGAGC42840.33228930577597No Hit
GGTCCGTCCGGTCTTCTAATGAACT38470.2983933145005034No Hit
GCGCGTTACATCTGGAGTAC31870.24720028419888337No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGGCGC24420.1894142121159941No Hit
CGCGTTACATCTGGAGTACGATAC22010.17072099953616013No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAACCA19930.15458743847140713No Hit
CCCCACAACCGCGCTTGACTAGCTTGCTGTTT18800.14582257116219038No Hit
TCCTGTGGTCTAGTGGTTAGGATTCGGCG18650.14465909320078993No Hit
AGTCGGCACTGGCAATTTTTGACAGTCTCTACGGAGACTG18590.14419370201622975No Hit
AGAAGTCAGCAACTTGATTCCAGCAGTAGT15940.12363892469815503No Hit
AATTTGTGGTAGTGGGGGATGGGCGCGCGCCGCGGCTGGACGAGGCGCCG15830.12278570752646137No Hit
AAGCTTGGGCTGCAGGTCGACCC15660.12146709917020752No Hit
CCCCACAACCGCGCTTGACT14620.11340031863783104No Hit
GGTCCGTCCGGTCTTCTAATGAACTAGCGAAC14460.11215927547900387No Hit
AGTCGGCATTGGCAATTTTTGACAGTCTCTACGGAGACTG13860.10750536363340205No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGCCCTGGTGGT13760.10672971165913507No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAACC13400.10393736455177399No Hit
AAGCTTGGGCTGCAGGTCGACCCGT13250.10277388659037355No Hit
TCCTGTGGTCTAGTGGTTAGGATTCG12910.10013666987786585No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)