FastQCFastQC Report
Fri 29 Sept 2023
SRR16955382.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR16955382.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6983736
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAATCATACTTCAGCAAGTGAGCCAGCATGGTTGGGCTGGTCAAATC185470.26557418550758505No Hit
GGCAGTTGTAACTTCGGTCTGAGTAGGATCGAAGATTGAACCGTATGTCG144120.20636518906212953No Hit
TGACAATCTGACACTCATCTTCATCACTTCACTGGTATCGTCGCCCAGTA122120.17486342553613138No Hit
GTCGGTTTCACGAACTGGGGTTGGGATATATTCATCGATGGTATCCATCA104760.15000567031743467No Hit
CTGGGCTTGCGGTTCTGCGTAGACACGGTATTCTTTACCGTCAACGACAA94900.13588715266441917No Hit
CCCTGCTACATGCGGCTCTACACCCATAGCCGATTTATTTAAAATTCGCT87970.12596409715372975No Hit
GTCATCATTAACGTTATAAACGATAGTCTTAATCTTGCCAGCTGGGGCAG82530.11817457017275568No Hit
CTTCGTTCCAGCCAAAGCTAGGGTTGTTTTCGGTGTGCTTCTTGATAGCT80460.11521054060462767No Hit
CCTGCTACATGCGGCTCTACACCCATAGCCGATTTATTTAAAATTCGCTG79630.11402206498069228No Hit
GTGGGTTGAATCATACTTCAGCAAGTGAGCCAGCATGGTTGGGCTGGTCA77390.11081461269440884No Hit
CGGCAGTTGTAACTTCGGTCTGAGTAGGATCGAAGATTGAACCGTATGTC77330.11072869879388339No Hit
GTTGACAATCTGACACTCATCTTCATCACTTCACTGGTATCGTCGCCCAG77270.11064278489335794No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)