FastQCFastQC Report
Thu 24 Aug 2023
SRR17007102_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR17007102_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85096762
Total Bases4.2 Gbp
Sequences flagged as poor quality0
Sequence length35-50
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAGATC2646110.31095307715703685No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2260010.26558119802490254No Hit
CCGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAGATC1689170.1984999147206095No Hit
GGGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAG1645560.19337516038506847No Hit
GCGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAGATC1627750.1912822487887377No Hit
CGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAGATCG1415540.16634475469231133No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAG1353450.15904835485984767No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG1314870.15451469234516818No Hit
GGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAGA1193290.1402274272198512No Hit
GGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAGATCG1110590.13050907859455332No Hit
GGGGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAAGAT1063980.1250317844056158No Hit
GGGGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGAAAAAAAAAAAAAAA990360.11638045640326479No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAG965730.11348610420687923No Hit
CGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAG862850.10139633750106733No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)