FastQCFastQC Report
Tue 19 Sept 2023
SRR17195297_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR17195297_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120221528
Total Bases4.7 Gbp
Sequences flagged as poor quality0
Sequence length15-40
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATC6430550.5348917208904548No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGCGCCTGTAGG5707980.4747885087602613No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACCTGTA3666800.3050036096696426No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCACCTGTAG3124360.25988357093581443No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATCTGTAG2555290.21254845471603057No Hit
TCGCCCGTCACGTTGAACGCACGTTCTGTAGGCACCATC2503970.2082796685132799No Hit
CCCGTCGCCGCGCTCTCCCTCTCCCCTGTAGGCACCATC2374680.1975253550262645No Hit
TTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCA2272670.18904018588085156No Hit
GTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACC2214840.18422989932385486No Hit
TTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCAT2141400.17812117643355854No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACTGTAG2070250.1722029352346944No Hit
TGGATAACTGTGGTAATTCTAGAGCTAATACATGCCTGT2004560.1667388556232624No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCTGTAGGCACCAT1852980.1541304648864553No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGCCTGTAGGCA1841160.1531472799114648No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGC1747720.1453749614628089No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCA1560100.12976877152983782No Hit
CCCGTCGCCGCGCTCTCCCTCTCCCCCTGTAGGCACCAT1545030.1285152522766139No Hit
TTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATC1525360.12687910604496727No Hit
CGATTAAAGTCCTACGTGATCTGAGTCTGTAGGCACCAT1525110.12685831110048776No Hit
TAGACCATTCGTAGACGACCTGCTTCTGTAGGCACCATC1463140.12170366026291064No Hit
TAAAGCATCTGGCCTACACCCAGAAGATTCTGTAGGCAC1452350.12080615045917567No Hit
CGTACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATC1425750.11859356836655743No Hit
TGTAGGCACCATCAAT1420010.11811611644130826No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCACTGTAGG1395950.11611481098460169No Hit
CGTACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCAT1289920.10729525913195848No Hit
TCGCCCGTCACGTTGAACGCACGTTCCTGTAGGCACCAT1287270.10707483272047581No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCTGTAGGCACCA1270620.10568988941814147No Hit
TCGCCCGTCACGTTGAACGCACGTTCGCTGTAGGCACCA1242940.10338747316537185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)