FastQCFastQC Report
Thu 21 Sept 2023
SRR17658118.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR17658118.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103867662
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length15-89
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT59395145.718347641251422No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT56401115.430093343200505No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC36174413.4827403739962874No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC26667422.5674420205973254No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC21027372.0244385591349885No Hit
CTCGCTTCTGGCGCCAAGCGTCCG20417421.9657147958139272No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT15302561.4732747137410294No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCC13659971.3151321341959157No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC13494291.2991810675395774No Hit
TCGCTTCTGGCGCCAAGCGTCCG13192511.270126788836356No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC13190921.2699737094303711No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC11521171.1092162640572385No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCCG11231101.0812893814823712No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCC10864921.0460349054549818No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC10502971.0111876784133256No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT9697940.9336823235705449No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCC9566940.921070120939085No Hit
TCGCTTCTGGCGCCAAGCGTCCGTCC7466290.7188271937804858No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA7415460.7139334666067674No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG5932270.5711373382025293No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5411940.521041861903082No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGG5374470.5174343868450606No Hit
CTCGCTTCTGGCGCCAAGCGTCCGTCC5040260.4852578659178831No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG4935640.4751854335567888No Hit
TCTCGCTTCTGGCGCCAAGCGTCCG4728520.45524467470924684No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG4713750.4538226729316387No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCCG4128780.3975038929825916No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA4032020.388188192779385No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC4010260.3860932192735791No Hit
CGGTTGGCCCCGGATAGCCGGGTCCC3443710.33154784980141366No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG3346780.3222157826176929No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGG3237360.311681223747965No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG3223190.31031698778393607No Hit
ATTGATCATCGACACTTCGAACGCA3167640.3049688362100612No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA3116440.30003948678463566No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT3065690.29515346171939444No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA3028720.29159412483935565No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGG2864770.2758096162788376No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCC2834880.2729319159990335No Hit
TCGGTTGGCCCCGGATAGCCGGGT2747830.2645510592122503No Hit
CTCGGTTGGCCCCGGATAGCCGGGT2652630.2553855501243496No Hit
TGGGGAAGGTGGCTCGGGGGG2620220.2522652334275128No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT2573380.2477556489140961No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAG2566430.24708652824013697No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT2544630.24498770368009248No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCC2533160.24388341387717No Hit
TGGGGGTGGGGGCCGGGCCGC2477700.238543927175332No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2440450.23495763291562297No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG2404140.23146183843052132No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCC2361660.2273720188291135No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA2266080.21816992472594599No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC2259130.21750080405198682No Hit
TCCCGGGGAGCCCGGCGGGTGCCGGCGCGGG2239660.21562630340134162No Hit
CGCTTCTGGCGCCAAGCGTCCGTCC2222010.2139270257185533No Hit
GTCTAGCGGTTAGGATTCCTGG2173140.20922200020252693No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGG2157510.2077172007587886No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCC2148080.20680931472203545No Hit
CCCCGCCCCTTGCCTCTCGGCGCCCC2136000.2056462963419741No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT2114570.20358309403363675No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCCCG2085310.2007660478580908No Hit
TCGTTTCCCGGTCAGGG2075430.19981483746115322No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCC2069590.19925258354231562No Hit
CCTCGGTTGGCCCCGGATAGCCGGGT2034370.1958617302852162No Hit
CCCGGGGAGCCCGGCGGGTGCCGGCGCGGG1979170.19054727543592923No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGC1903980.18330825623089506No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1790860.17241747484409536No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC1787860.17212864577619932No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1776330.17101857939191892No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA1772150.1706161442239838No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1766310.1700538903051462No Hit
TCGCTTCTGGCGCCAAGCGTCCGT1723830.16596407070373836No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCC1686340.16235467011859764No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCC1640910.15798083526709208No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCC1609220.15492983754655035No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC1607500.15476424221428994No Hit
TCGCTTCTGGCGCCAAGCGTCCGTC1596220.15367824491900087No Hit
CTCGCCCGTCACGTTGAACGCACGTTCG1560090.150199780177973No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGG1530780.14737792018462878No Hit
TCGGTTGGCCCCGGATAGCCGGGTCC1528390.1471478196938716No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCC1507200.14510772371096597No Hit
ATTGATCATCGACACTTCGAACGCAC1504070.14480637871679447No Hit
CTCGCCCGTCACGTTGAACGCACGTTC1484570.14292898977547025No Hit
CCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1456250.14020244337453172No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA1431370.13780708763811397No Hit
CCCCGCCCCTTGCCTCTCGGCGCCC1417020.13642552193001128No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1388620.13369127342059553No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG1384550.1332994286518166No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1372020.13209308591157082No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG1320910.1271724013581821No Hit
TGGGGGTGGGGGCCGGGCCG1319370.1270241357699955No Hit
CGGGGCTACGCCTGTCTGAGCGTCGCT1315730.12667368983428162No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1306440.1257792824873636No Hit
TAAGTGGGAGGCCCCCGGCGCCCGGCCC1292440.12443141350384879No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1288480.12405015913422601No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCC1281130.12334252791788072No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG1268060.12208419594541368No Hit
CCCCCGCCCCTTGCCTCTCGGC1251850.12052355621521547No Hit
CTCGCTTCTGGCGCCAAGCGTCCGT1225150.1179529775109408No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCC1213610.11684194836310074No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGA1178830.11349345670262607No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCC1174290.11305636204654343No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAAT1143760.11011704489892148No Hit
TCTCGCTTCTGGCGCCAAGCGTCCGTCC1099470.1058529650932164No Hit
CCGGGGCTACGCCTGTCTGAGCGTCGCT1083850.10434912841303773No Hit
CTCGCCCGTCACGTTGAACGCACGTT1081210.10409495883328924No Hit
CCCGCCCCTTGCCTCTCGGCGCCCC1075190.10351537517037787No Hit
CCTCGCTTCTGGCGCCAAGCGTCCG1064800.10251506383189793No Hit
CTCGCTTCTGGCGCCAAGCGTCCGTC1055690.10163798622905365No Hit
TTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGG1046500.10075320651773215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)