FastQCFastQC Report
Tue 19 Sept 2023
SRR17658120.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR17658120.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53377101
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length15-89
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT28871995.409059214362354No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT27740775.197129383253691No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGT15209002.8493491993879547No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC11757282.2026823824695914No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC11558472.165436073420323No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC10087771.889905935505939No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGG7205391.3499028356747962No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC7097711.329729390886178No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC6809801.2757905304748567No Hit
CTCGCTTCTGGCGCCAAGCGTCCG6385931.1963800731703282No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAC6270001.1746610217741125No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAT5358651.0039230118548401No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCC5286030.9903179267828726No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCC5202860.974736338715735No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCC5033470.9430017565022875No Hit
TCGCTTCTGGCGCCAAGCGTCCG4101080.7683219813680028No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC4093310.7668663009630291No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT3985110.7465954361215683No Hit
TACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCC3643850.6826616529811164No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCCG3381650.6335394647978354No Hit
TCGCTTCTGGCGCCAAGCGTCCGTCC2880120.539579697293789No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2513290.47085547040106207No Hit
CTCGCTTCTGGCGCCAAGCGTCCGTCC2180470.40850288965674625No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG2162080.4050575920187198No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCG2122100.39756748872517444No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATA2012150.3769687679366476No Hit
TGGGGGTGGGGGCCGGGCCGC1975080.3700238422465094No Hit
TTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGT1934280.3623801150234817No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1932190.36198856134955704No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG1816830.340376297318957No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCC1729490.3240134753665247No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1684780.3156372242846235No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCG1572300.2945645174697667No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCC1549630.29031737785834416No Hit
TCTCGCTTCTGGCGCCAAGCGTCCG1539340.28838958488959526No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGG1497260.2805060544595706No Hit
TCGTTTCCCGGTCAGGG1477710.27684343516520316No Hit
CCCCGCCCCTTGCCTCTCGGCGCCCC1472640.27589358964998867No Hit
TCCCGGGGAGCCCGGCGGGTGCCGGCGCGGG1313910.24615611851981248No Hit
GTCTAGCGGTTAGGATTCCTGG1304740.24443815335718588No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA1293060.24224994909333875No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCC1276120.2390763035257385No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGA1263440.23670075300642499No Hit
CGGTTGGCCCCGGATAGCCGGGTCCC1232820.23096421066404488No Hit
CGGTTGGCCCCGGATAGCCGGGTCCCCG1225330.22956098721060178No Hit
TTTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGT1184700.22194910885100336No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAA1151850.21579478435893323No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGG1138670.21332556071188652No Hit
ATTGATCATCGACACTTCGAACGCA1118100.2094718482369434No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGG1104820.20698388996435008No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1100200.20611835026409547No Hit
ACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCC1098880.20587105320687984No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG1091200.20443223396489815No Hit
CCCGGGGAGCCCGGCGGGTGCCGGCGCGGG1082950.20288662735730065No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA1056980.19802124510283917No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT1053670.1974011289972455No Hit
TGGGGAAGGTGGCTCGGGGGG1014170.19000095190632404No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT992040.18585497927285335No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCC970900.1818944794322944No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT967840.1813211998905673No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG962990.18041257055155543No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT938130.17575514264066158No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG930640.1743519191872185No Hit
CCCCGCCCCTTGCCTCTCGGCGCCC922970.17291497340779147No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCC894700.1676186947657573No Hit
CGCTTCTGGCGCCAAGCGTCCGTCC890160.16676814276594001No Hit
CTCGCCCGTCACGTTGAACGCACGTTCG886190.16602437813173856No Hit
TGGGGGTGGGGGCCGGGCCG878890.1646567504668341No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC873100.1635720156476838No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG871430.163259147401055No Hit
CCTCGGTTGGCCCCGGATAGCCGGGT851840.1595890342564689No Hit
CTCGGTTGGCCCCGGATAGCCGGGT833080.15607441850391987No Hit
CTCGCCCGTCACGTTGAACGCACGTTC825090.15457752192274363No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCC818820.15340286090096952No Hit
TACCCGTCGCCGCGCTCTCCCTCTCCCC818620.15336539164987623No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC802830.1504071942760623No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCC787660.14756515158063754No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGG781870.1464804167614873No Hit
CCCCCGCCCCTTGCCTCTCGGC781240.1463623886205435No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCA777610.14568232171320056No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCC775410.14527015995117457No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAG740340.13869992677196913No Hit
TCGGTTGGCCCCGGATAGCCGGGT724220.1356799051338513No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC719030.13470757806798087No Hit
CTCGGTTGGCCCCGGATAGCCGGGTCCCCGT709540.13292966210360507No Hit
CCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT699870.1311180238132453No Hit
CCCCGCCCCTTGCCTCTCGGC698680.13089508176924033No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCC683210.12799683519717567No Hit
ATCGACACTTCGAACGCACTTGCGGCCCCGGGT673110.12610463801696536No Hit
TCGCTTCTGGCGCCAAGCGTCCGTC662600.12413562887201386No Hit
CGGGGCTACGCCTGTCTGAGCGTCGCT651060.12197365308393202No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT650690.12190433496940944No Hit
TGGTGACTCTAGATAACCTCGGGCCGATCGCAC646810.12117743149819996No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCC646730.12116244379776263No Hit
TCCCGGGGAGCCCGGCGGGTGCCGGCGCGG638430.11960746987739179No Hit
GGGGGTGGGGGCCGGGCCGC624620.1170202180894013No Hit
CCCGCCCCTTGCCTCTCGGCGCCCC598120.11205554231954261No Hit
CCCGGGGAGCCCGGCGGGTGCCGGCGCGG595610.11158530321832202No Hit
CCCCCGCCTCCCCTCCG593940.11127243497169319No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG589400.11042188297187588No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA587710.11010526780013774No Hit
TAAGTGGGAGGCCCCCGGCGCCCGGCCC581780.10899430450522218No Hit
ATTGATCATCGACACTTCGAACGCAC580920.10883318672552111No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCC579240.10851844501633763No Hit
TTCGGTTGGCCCCGGATAGCCGGGTCCCCG575430.10780465578301077No Hit
TCGGTTGGCCCCGGATAGCCGGGTCC572810.10731380859368889No Hit
GTCTAGCGGTTAGGATTCCTGGT569760.10674240251451649No Hit
TCGCTTCTGGCGCCAAGCGTCCGT565030.10585625472616057No Hit
TCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG551980.10341138609232449No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAAT549290.10290742466511997No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCC547190.10251399752864061No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT542040.10154916431298883No Hit
GTCTAGGGGTATGATTCTCGCTT540140.10119320642760274No Hit
CTCGCCCGTCACGTTGAACGCACGTT535250.10027708323837219No Hit
AGCCTCGGTTGGCCCCGGATAGCCGGGTCCC533820.10000917809305529No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)