FastQCFastQC Report
Tue 19 Sept 2023
SRR17818681_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR17818681_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98873749
Total Bases7.4 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAA16382061.6568664752461242No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCAAT3323900.3361761876754567No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAACTGTAGGCACCATCAAT2844080.28764763435843826No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAACTGTAGGCACCATCA2551850.25809176103962644No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGAACTGTAGGCACCATCAATC1722180.1741797006200301No Hit
GCAGCTAACGCGTTAAATGATCCGCCTGAGTAACTGTAGGCACCATCAAT1515830.15330965148292294No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAACTGTAGGCACCATCA1067360.1079518083207303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)