FastQCFastQC Report
Fri 30 Jun 2023
SRR1802150.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1802150.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16962098
Total Bases865 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT6392013.7684076580621095No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA1879991.1083475640808111No Hit
TGGCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGATC1695870.9997996710076784No Hit
TGGCGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATCG1655090.9757578337302378No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAATAGA1460770.8611965335891822No Hit
TCGGCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGAT1417600.8357456724987675No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAATAG1270090.7487811944017774No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCTGTAGGCACCATCAAT1220910.7197871395389887No Hit
TCGGCGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATC1210940.7139093289049503No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAATA1183230.6975729063704266No Hit
ACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGATCG1136090.6697815329212223No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAA1098870.6478384926204294No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA973130.5737085117654668No Hit
GGCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGATCG915840.5399332087339668No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAATAGATC832290.4906763302511281No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCA806250.47532445573654863No Hit
GGCGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATCGG775860.4574080399724138No Hit
TCTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCTGTAGGCACCATCAA770360.45416551655343584No Hit
AGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCACCA767530.45249709086694345No Hit
TGTCCGGTGCGGAGTGCCCTTCGTCCTGGGACTGTAGGCACCATCAATAG754670.44491548156366034No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAATA690210.4069131070932381No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAATAGATCG664250.3916083965556619No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATCTGTAGGCACCATCAATA657420.3875817720190038No Hit
TCGGCGGGGCGCGGGACATGTGGCGTACTGTAGGCACCATCAATAGATCG519820.3064597315732995No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAATA516550.3045319040132889No Hit
TGGCGGGGCGCGGGACATGTGGCGTACTGTAGGCACCATCAATAGATCGG464860.2740580793720211No Hit
TCGGCGGGGCGCGGGACATGTGGCGTACGGCTGTAGGCACCATCAATAGA455900.26877571394764965No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAACTGTAGGCACCATCAA452900.2670070648100253No Hit
GAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAATAGA448830.2646075974799815No Hit
CGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAATAGATCG447560.2638588693450539No Hit
CGGCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGATC445970.26292148530211296No Hit
CCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATC429090.2529698861544132No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGA427850.2522388445108618No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAATAGATC426710.2515667578385645No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT413460.24375522414739026No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCA412340.24309492846934386No Hit
TGGCGGGGCGCGGGACATGTGGCGTACGGCTGTAGGCACCATCAATAGAT409270.24128501085184154No Hit
ATGTACACGGAGTCGACCCAACGCGACTGTAGGCACCATCAATAGATCGG407360.24015897090088736No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC400600.23617361484410712No Hit
CGGCGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATCG392890.2316281865604125No Hit
CGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAATAGATC392860.23161050006903627No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAATAGATCG390890.2304490871353296No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGACTGTAGGCACCATCAAT386320.22775484494901516No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCACCAT385920.22751902506399857No Hit
AGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCAT383320.2259861958113908No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGACTGTAGGCACCATCAATA382570.2255440335269847No Hit
ACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCCTGTAGGCACCATC366370.21599332818381312No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAATAGAT364640.21497340718111638No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT363090.21405960512667715No Hit
TCGTACGTAGCAGAGCAGCTCTGTAGGCACCATCAATAGATCGGAAGAGC355720.2097146237452466No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATCTGTAGGCACCATCA353640.20848836034316037No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAACTGTAGGCACCATCAAT338830.19975712910042143No Hit
TCGGCGGGGCGCGGGACATGTGGCGTACGGAAGCTGTAGGCACCATCAAT337430.1989317595028634No Hit
TGTCCGGTGCGGAGTGCCCTTCGTCCTGGGCTGTAGGCACCATCAATAGA336770.19854265669258603No Hit
CGGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATC335020.19751094469563849No Hit
TATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCTGTAGGCACCA331950.19570102707813622No Hit
TCGGCGGGGCGCGGGACATGTGGCGTACGGACTGTAGGCACCATCAATAG329880.1944806591731754No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAATAG329190.19407386987152178No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAATAG327210.1929065614406897No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATACCTGTAGGCACCATCAATAG315390.1859380838384497No Hit
CCGGCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGAT313490.18481793938462093No Hit
CCGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCA311380.18357398949115847No Hit
TCGGCGGGGCGCGGGACATGTGGCGTACGGAACTGTAGGCACCATCAATA307650.18137496906337883No Hit
TCGGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCAT305900.18034325706643128No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGACTGTAGGCACCATCAA295930.17446544643239298No Hit
TGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCA292120.17221926202761No Hit
TCGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCA288010.16979621270906464No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAATAG287290.1693717369160348No Hit
CCTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCTGTAGGCACCATCAA284030.16744980485314964No Hit
CGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAATAGATCGG267790.1578755175214764No Hit
CCGGCGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATC257700.1519269609219331No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAATAGATCGG254810.15022316225268834No Hit
GGCGGGGCGCGGGACATGTGGCGTACGGCTGTAGGCACCATCAATAGATC254500.15004040184180045No Hit
TGGCGGGGCGCGGGACATGTGGCGTACGGACTGTAGGCACCATCAATAGA248250.14635571613841636No Hit
CGTGATGGGGATCGGGGATTCTGTAGGCACCATCAATAGATCGGAAGAGC247500.14591355385401028No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAATAGATC242610.14303065575968255No Hit
GCGGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCAT238870.1408257398347775No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAATAGA238370.14053096497850678No Hit
GCGGCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGAT235550.13886843478913988No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAATAGA234480.13823761659672054No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAATAGA232950.1373356055365321No Hit
TTGGCGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATC231650.1365691909102282No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATCTGTAGGCACCATCAA223300.13164645081050705No Hit
TGGCGGGGCGCGGGACATGTGGCGTACGGAACTGTAGGCACCATCAATAG217010.1279381831186213No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAATA212360.12519677695530354No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAATAGAT210050.12383491711933277No Hit
TTGGCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGAT207990.12262044471149736No Hit
TCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC207510.12233746084947747No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATA206840.12194246254207469No Hit
GGCGGGGCGCGGGACATGTGGCGTACTGTAGGCACCATCAATAGATCGGA206180.12155335973179733No Hit
AGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTGCTGTAGGCACC205750.1212998533554045No Hit
CGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAATA199230.11745598922963423No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAATAGATC198640.11710815489923475No Hit
GCGGCGGGGCGCGGGACATGTGGCGTACCTGTAGGCACCATCAATAGATC198520.11703740893372978No Hit
GGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCTGTAGGCACCATCAATAG197450.11640659074131042No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAATAGAT193460.11405428738827002No Hit
ACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCA193260.11393637744576172No Hit
GCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGATCGG188820.11131877672207766No Hit
TAAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCAC187600.11059952607277708No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTCCTGTAGGCACCATCAA185980.10964445553845992No Hit
TGGCGGGGCGCGGGACATGTGGCGTACGGAAGCTGTAGGCACCATCAATA183880.10840640114212285No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAATAG183000.1078875973950864No Hit
AACATCACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT182260.1074513306078057No Hit
CCGTCGCCGCGCTCTCCCCCCTCCCGGCGCCTGTAGGCACCATCAATAGA178730.10537022012253439No Hit
TCGGGGCGCGGGACATGTGGCGTACGCTGTAGGCACCATCAATAGATCGG177180.10445641806809511No Hit
TCGCCGCGACCGGCTCCGGGACGGCTGGGAAGGCCCCTGTAGGCACCATC175950.10373127192166913No Hit
ATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGCTGTAGGCACCATC174820.10306508074649728No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)